euL1db
The European database of L1-HS retrotransposon insertions in humans

Home Background Search Browse Utilities Help FAQ Data Contact
Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip136 chr1 24775512 24775512 + unknown germline validated no 582 NIPAL3
srip1956 chr1 79023145 79023145 + unknown germline validated no 582 .
srip2056 chr1 83609125 83609125 - unknown germline validated no 582 .
srip2884 chr1 102545056 102545056 - unknown germline validated no 582 .
srip3081 chr1 102569114 102569114 + unknown germline validated no 582 .
srip3638 chr1 114976882 114976882 - unknown germline validated no 582 TRIM33
srip4156 chr1 152443698 152443698 - unknown germline validated no 582 .
srip4636 chr1 165531706 165531706 - unknown germline validated no 582 LRRC52;LOC400794
srip5265 chr1 179575197 179575197 - unknown germline validated no 582 TDRD5
srip5849 chr1 192262162 192262162 - unknown germline validated no 582 .
srip7422 chr1 242496596 242496596 + unknown germline validated no 582 PLD5
srip7796 chr10 19065550 19065550 - unknown germline validated no 582 .
srip10469 chr10 91717532 91717532 - unknown germline validated no 582 .
srip11234 chr10 110453931 110453931 + unknown germline validated no 582 .
srip11983 chr10 133016641 133016641 - unknown germline validated no 582 TCERG1L
srip11999 chr10 133528481 133528481 - unknown germline validated no 582 .
srip12564 chr11 15380364 15380364 + unknown germline validated no 582 .
srip12649 chr11 19652293 19652293 - unknown germline validated no 582 NAV2
srip12955 chr11 26159927 26159927 - unknown germline validated no 582 .
srip13275 chr11 30180703 30180703 + unknown germline validated no 582 .
srip13923 chr11 37811369 37811369 + unknown germline validated no 582 .
srip15872 chr11 67599491 67599491 + unknown germline validated no 582 LOC100421859
srip15888 chr11 67777074 67777074 - unknown germline validated no 582 ALDH3B1
srip16480 chr11 83652293 83652293 - unknown germline validated no 582 DLG2
srip16819 chr11 91203062 91203062 - unknown germline validated no 582 .
srip17812 chr11 105479182 105479182 + unknown germline validated no 582 .
srip18285 chr11 114895734 114895734 + unknown germline validated no 582 .
srip18526 chr11 123241906 123241906 + unknown germline validated no 582 .
srip20426 chr12 25775766 25775766 - unknown germline validated no 582 IFLTD1
srip21115 chr12 34017161 34017161 - unknown germline validated no 582 .
srip21934 chr12 42637062 42637062 + unknown germline validated no 582 .
srip22837 chr12 48929157 48929157 + unknown germline validated no 582 .
srip24656 chr12 84965334 84965334 + unknown germline validated no 582 .
srip24930 chr12 85506395 85506395 + unknown germline validated no 582 LRRIQ1
srip25413 chr12 117814367 117814367 - unknown germline validated no 582 .
srip28022 chr13 42771428 42771428 + unknown germline validated no 582 DGKH
srip28499 chr13 61221023 61221023 - unknown germline validated no 582 .
srip35389 chr14 31150525 31150525 - unknown germline validated no 582 SCFD1
srip37068 chr14 51311482 51311482 - unknown germline validated no 582 .
srip37363 chr14 59220500 59220500 + unknown germline validated no 582 .
srip37684 chr14 67419610 67419610 - unknown germline validated no 582 GPHN
srip37955 chr14 68784350 68784350 + unknown germline validated no 582 RAD51B
srip38166 chr14 71197806 71197806 + unknown germline validated no 582 MAP3K9
srip38189 chr14 72333521 72333521 - unknown germline validated no 582 .
srip38421 chr14 86307570 86307570 + unknown germline validated no 582 .
srip38443 chr14 86381662 86381662 - unknown germline validated no 582 .
srip38835 chr14 90497183 90497183 - unknown germline validated no 582 TDP1
srip39107 chr15 25253952 25253952 - unknown germline validated no 582 SNRPN
srip39134 chr15 27875825 27875825 + unknown germline validated no 582 .
srip39585 chr15 35654003 35654003 - unknown germline validated no 582 .
srip39630 chr15 37707731 37707731 - unknown germline validated no 582 .
srip39906 chr15 45567581 45567581 - unknown germline validated no 582 SLC28A2
srip40690 chr15 51189570 51189570 + unknown germline validated no 582 .
srip40738 chr15 51843910 51843910 + unknown germline validated no 582 DMXL2
srip40961 chr15 53956368 53956368 + unknown germline validated no 582 WDR72
srip41260 chr15 56251651 56251651 + unknown germline validated no 582 NEDD4
srip41516 chr15 61328808 61328808 - unknown germline validated no 582 RORA
srip42625 chr15 85649502 85649502 + unknown germline validated no 582 PDE8A
srip43460 chr16 5338879 5338879 + unknown germline validated no 582 .
srip44041 chr16 16934247 16934247 - unknown germline validated no 582 .
srip44444 chr16 22945701 22945701 - unknown germline validated no 582 .
srip44790 chr16 32525376 32525376 - unknown germline validated no 582 .
srip45714 chr16 55292232 55292232 + unknown germline validated no 582 .
srip46472 chr16 89978226 89978226 + unknown germline validated no 582 .
srip47379 chr17 28398481 28398481 + unknown germline validated no 582 EFCAB5
srip47717 chr17 32813910 32813910 + unknown germline validated no 582 .
srip48097 chr17 64551116 64551116 - unknown germline validated no 582 PRKCA
srip48453 chr17 68357562 68357562 + unknown germline validated no 582 .
srip49859 chr18 49216083 49216083 - unknown germline validated no 582 .
srip51009 chr18 59579982 59579982 + unknown germline validated no 582 .
srip51410 chr18 69617399 69617399 + unknown germline validated no 582 .
srip52171 chr19 24602154 24602154 - unknown germline validated no 582 .
srip53163 chr2 22706685 22706685 + unknown germline validated no 582 .
srip53958 chr2 35879443 35879443 + unknown germline validated no 582 .
srip54947 chr2 53460161 53460161 + unknown germline validated no 582 .
srip56626 chr2 92306795 92306795 + unknown germline validated no 582 .
srip56648 chr2 92319432 92319432 - unknown germline validated no 582 .
srip56682 chr2 92324483 92324483 - unknown germline validated no 582 .
srip56789 chr2 106151450 106151450 - unknown germline validated no 582 .
srip56912 chr2 106163220 106163220 + unknown germline validated no 582 .
srip58394 chr2 143370703 143370703 - unknown germline validated no 582 .
srip58586 chr2 144010847 144010847 + unknown germline validated no 582 ARHGAP15
srip59716 chr2 168735299 168735299 - unknown germline validated no 582 .
srip61637 chr2 212707721 212707721 + unknown germline validated no 582 ERBB4
srip62370 chr2 230341968 230341968 + unknown germline validated no 582 DNER
srip62646 chr2 235519844 235519844 + unknown germline validated no 582 .
srip62745 chr20 6105791 6105791 - unknown germline validated no 582 .
srip63330 chr20 16479373 16479373 - unknown germline validated no 582 KIF16B
srip64141 chr20 29591676 29591676 + unknown germline validated no 582 .
srip64603 chr20 41951972 41951972 - unknown germline validated no 582 .
srip65641 chr21 19517214 19517214 - unknown germline validated no 582 .
srip67148 chr22 17246312 17246312 + unknown germline validated no 582 .
srip67248 chr22 19210951 19210951 + unknown germline validated no 582 CLTCL1
srip68586 chr22 44324380 44324380 - unknown germline validated no 582 PNPLA3
srip69823 chr3 3408404 3408404 + unknown germline validated no 582 .
srip70557 chr3 21235006 21235006 + unknown germline validated no 582 .
srip70647 chr3 22440113 22440113 + unknown germline validated no 582 .
srip71940 chr3 38626129 38626129 + unknown germline validated no 582 SCN5A
srip72051 chr3 44300491 44300491 - unknown germline validated no 582 C3orf77
srip72835 chr3 58783947 58783947 + unknown germline validated no 582 C3orf67
srip73493 chr3 65685575 65685575 + unknown germline validated no 582 MAGI1
srip73888 chr3 75670011 75670011 - unknown germline validated no 582 UNC93B3
srip73904 chr3 75691138 75691138 - unknown germline validated no 582 .
srip74056 chr3 79216420 79216420 + unknown germline validated no 582 ROBO1
srip74628 chr3 81990731 81990731 - unknown germline validated no 582 .
srip75623 chr3 85576631 85576631 + unknown germline validated no 582 CADM2
srip75963 chr3 90456520 90456520 - unknown germline validated no 582 .
srip76913 chr3 123033794 123033794 + unknown germline validated no 582 ADCY5
srip77298 chr3 123590896 123590896 + unknown germline validated no 582 MYLK
srip77507 chr3 131069981 131069981 + unknown germline validated no 582 LOC339874
srip78085 chr3 143121667 143121667 - unknown germline validated no 582 SLC9A9
srip78340 chr3 150210561 150210561 - unknown germline validated no 582 .
srip79283 chr3 161145847 161145847 + unknown germline validated no 582 RPL23AP42
srip79893 chr3 169270360 169270360 + unknown germline validated no 582 MECOM
srip81843 chr3 193354030 193354030 - unknown germline validated no 582 OPA1
srip83859 chr4 29322214 29322214 + unknown germline validated no 582 .
srip85476 chr4 58126491 58126491 - unknown germline validated no 582 .
srip85631 chr4 58917248 58917248 - unknown germline validated no 582 .
srip87045 chr4 71093393 71093393 + unknown germline validated no 582 C4orf7
srip87394 chr4 80768650 80768650 + unknown germline validated no 582 GDEP
srip89031 chr4 104214774 104214774 + unknown germline validated no 582 .
srip90359 chr4 115132827 115132827 + unknown germline validated no 582 .
srip91186 chr4 128965197 128965197 - unknown germline validated no 582 .
srip91517 chr4 132181331 132181331 - unknown germline validated no 582 .
srip93288 chr4 151582619 151582619 + unknown germline validated no 582 LRBA
srip93329 chr4 152732601 152732601 - unknown germline validated no 582 .
srip95399 chr4 190659942 190659942 + unknown germline validated no 582 .
srip96096 chr5 9055982 9055982 + unknown germline validated no 582 SEMA5A
srip96816 chr5 20458616 20458616 + unknown germline validated no 582 .
srip96994 chr5 23070279 23070279 + unknown germline validated no 582 .
srip97976 chr5 33797341 33797341 - unknown germline validated no 582 ADAMTS12
srip98397 chr5 41602121 41602121 + unknown germline validated no 582 .
srip99124 chr5 57428108 57428108 + unknown germline validated no 582 .
srip99148 chr5 59591041 59591041 + unknown germline validated no 582 PDE4D
srip99325 chr5 67721751 67721751 + unknown germline validated no 582 .
srip99617 chr5 68618005 68618005 - unknown germline validated no 582 .
srip102653 chr5 112449536 112449536 - unknown germline validated no 582 MCC
srip102901 chr5 124155264 124155264 - unknown germline validated no 582 .
srip103385 chr5 125040179 125040179 + unknown germline validated no 582 .
srip103563 chr5 132934117 132934117 + unknown germline validated no 582 FSTL4
srip104020 chr5 144233373 144233373 - unknown germline validated no 582 .
srip104037 chr5 144330739 144330739 - unknown germline validated no 582 .
srip104870 chr5 155333706 155333706 - unknown germline validated no 582 .
srip105293 chr5 157867170 157867170 - unknown germline validated no 582 .
srip105501 chr5 159351006 159351006 - unknown germline validated no 582 ADRA1B
srip106900 chr6 13135020 13135020 + unknown germline validated no 582 PHACTR1
srip107576 chr6 13503253 13503253 + unknown germline validated no 582 .
srip107643 chr6 18227737 18227737 + unknown germline validated no 582 DEK
srip108143 chr6 36498040 36498040 + unknown germline validated no 582 STK38
srip108354 chr6 45934271 45934271 + unknown germline validated no 582 CLIC5
srip108823 chr6 53285027 53285027 + unknown germline validated no 582 .
srip108962 chr6 56758359 56758359 - unknown germline validated no 582 LOC100652827
srip110335 chr6 73716580 73716580 + unknown germline validated no 582 KCNQ5
srip110573 chr6 77379855 77379855 - unknown germline validated no 582 .
srip111316 chr6 83678042 83678042 - unknown germline validated no 582 UBE2CBP
srip112851 chr6 108786737 108786737 - unknown germline validated no 582 LACE1
srip113434 chr6 125692148 125692148 - unknown germline validated no 582 .
srip113639 chr6 142449929 142449929 - unknown germline validated no 582 .
srip116436 chr7 22783334 22783334 + unknown germline validated no 582 .
srip116499 chr7 25081285 25081285 - unknown germline validated no 582 .
srip116607 chr7 26794974 26794974 + unknown germline validated no 582 SKAP2
srip116793 chr7 34440719 34440719 + unknown germline validated no 582 AAA1
srip118004 chr7 62178856 62178856 + unknown germline validated no 582 .
srip118354 chr7 66590847 66590847 - unknown germline validated no 582 TYW1
srip120392 chr7 88003097 88003097 - unknown germline validated no 582 .
srip121146 chr7 105968058 105968058 + unknown germline validated no 582 .
srip122644 chr7 122124598 122124598 + unknown germline validated no 582 CADPS2
srip123486 chr7 145115410 145115410 - unknown germline validated no 582 .
srip123731 chr7 155158659 155158659 - unknown germline validated no 582 .
srip124836 chr8 11731373 11731373 + unknown germline validated no 582 .
srip124964 chr8 18455923 18455923 + unknown germline validated yes 582 PSD3
srip125264 chr8 24926274 24926274 - unknown germline validated no 582 .
srip125723 chr8 40432892 40432892 - unknown germline validated no 582 ZMAT4
srip125830 chr8 43784668 43784668 + unknown germline validated no 582 .
srip126413 chr8 58348186 58348186 + unknown germline validated no 582 .
srip127021 chr8 72399104 72399104 - unknown germline validated no 582 .
srip128034 chr8 83740734 83740734 + unknown germline validated no 582 .
srip128194 chr8 85428807 85428807 + unknown germline validated no 582 RALYL
srip128856 chr8 112121121 112121121 - unknown germline validated no 582 .
srip129023 chr8 115788352 115788352 - unknown germline validated no 582 .
srip130573 chr9 4265600 4265600 + unknown germline validated no 582 GLIS3
srip131161 chr9 7327229 7327229 - unknown germline validated no 582 .
srip131178 chr9 7426706 7426706 - unknown germline validated no 582 .
srip133886 chr9 70999188 70999188 + unknown germline validated no 582 PGM5
srip134157 chr9 82082611 82082611 - unknown germline validated no 582 .
srip135465 chr9 110018307 110018307 - unknown germline validated no 582 .
srip135596 chr9 111565179 111565179 + unknown germline validated no 582 .
srip136192 chrX 3878925 3878925 - unknown germline validated no 582 .
srip136367 chrX 11953283 11953283 - unknown germline validated yes 582 .
srip136389 chrX 14151668 14151668 - unknown germline validated no 582 .
srip136602 chrX 21300794 21300794 + unknown germline validated no 582 .
srip137360 chrX 55584934 55584934 - unknown germline validated no 582 .
srip137803 chrX 61870985 61870985 + unknown germline validated no 582 .
srip139797 chrX 98920814 98920814 - unknown germline validated no 582 LOC442459
srip140101 chrX 102363307 102363307 + unknown germline validated no 582 .
srip140311 chrX 111557667 111557667 - unknown germline validated no 582 ZCCHC16
srip140652 chrX 119892535 119892535 - unknown germline validated no 582 .
srip141167 chrX 124637032 124637032 - unknown germline validated no 582 .
srip141203 chrX 129525062 129525062 - unknown germline validated no 582 .
srip141575 chrX 136180970 136180970 - unknown germline validated no 582 .
srip142288 chrY 13490753 13490753 + unknown germline validated no 582 .
srip142336 chrY 13878782 13878782 + unknown germline validated no 582 .
srip142480 chrY 58980643 58980643 - unknown germline validated no 582 .